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Am J Physiol Heart Circ Physiol 290: H2351-H2361, 2006. First published January 13, 2006; doi:10.1152/ajpheart.01111.2005
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Regulation of antisense RNA expression during cardiac MHC gene switching in response to pressure overload

F. Haddad, A. X. Qin, P. W. Bodell, L. Y. Zhang, H. Guo, J. M. Giger, and K. M. Baldwin

Department of Physiology and Biophysics, University of California, Irvine, California

Submitted 20 October 2005 ; accepted in final form 9 January 2006

Hypertension has been shown to cause cardiac hypertrophy and a shift in myosin heavy chain (MHC) gene expression from the faster {alpha}- to slower beta-MHC isoform. The expression of the beta- and {alpha}-MHC pre-mRNAs, mRNAs, as well as the newly discovered antisense beta-RNA were analyzed in three regions of the normal control (NC) and 12-day pressure-overloaded (AbCon) hearts: the left ventricle apex, left ventricle base, and the septum. The RNA analyses in the AbCon heart targeted both the 5' and the 3' ends of each RNA molecule. beta-MHC mRNA expression significantly increased relative to control in all three regions, regardless of the target site (5' or 3' end). In contrast, beta-MHC pre-mRNA expression in the AbCon heart depended on the site of the measurement (5' vs. 3' end). For example, whereas the pre-mRNA did not change when targeted at the 3' end (last intron), it increased significantly in the AbCon heart when measurement targeted the 5' end (2nd intron) of the 25-kb molecule. Analyses of the antisense beta-RNA revealed that its expression in the AbCon heart was significantly decreased relative to control regardless of its measurement site. A negative correlation was observed between the beta-mRNA expression and the antisense beta-RNA (P < 0.05), suggesting an inhibitory role of antisense RNA on the sense beta-MHC gene expression. In contrast, a positive correlation was observed between the antisense beta-RNA and the {alpha}-MHC pre-mRNA (P < 0.05). This latter observation along with the {alpha}-MHC gene position relative to that of the beta-antisense suggest that the {alpha}-MHC sense and beta-antisense transcription are coregulated likely via common intergenic regulatory sequences. Our results suggest that the increased beta-MHC expression in the AbCon heart not only is the result of increased beta-MHC transcription but also involves an antisense beta-RNA regulation scheme. Although the exact mechanism concerning antisense regulation is not clear, it could involve modulation of both transcriptional activity of the beta-MHC gene and posttranscriptional processing.

premRNA; gene transcription; posttranscription; hypertension; RT-PCR; Sprague-Dawley rats



Address for reprint requests and other correspondence: F. Haddad, Physiology and Biophysics Dept., Univ. of California, Irvine, CA 92697-4560 (e-mail: fhaddad{at}uci.edu)




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