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1 Program in Molecular and Cellular Cardiology and 2 Departments of Medicine and Pharmacology, Harper Hospital, Wayne State University School of Medicine, and Department of Veterans Affairs Medical Center, Detroit, Michigan 48201
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ABSTRACT |
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The
1-subunit of the cardiac/vascular Ca2+
channel, which is the dihydropyridine (DHP)-binding site (the DHP
receptor), provides the pore structure for Ca2+ entry. It
contains the binding sites for multiple classes of drugs collectively
known as Ca2+ antagonists. As an initial step toward
understanding the mechanisms controlling transcription of the rat
cardiac
1C-subunit gene, we have cloned a 2.3-kb
fragment containing the 5'-flanking sequences and identified the
1C-subunit gene transcription start site. The rat
1C-subunit gene promoter belongs to the TATA-less class of such basal elements. Using deletion analysis of
1C-subunit promoter-luciferase reporter gene constructs,
we have characterized the transcriptional modulating activity of the
5'-flanking region and conducted transient transfections in
cultured neonatal rat cardiac ventricular myocytes and vascular smooth
muscle cells. Sequence scanning identified several potential regulatory
elements, including five consensus sequences for the cardiac-specific
transcription factor Nkx2.5, an AP-1 site, a cAMP response element, and
a hormone response element. Transient transfection experiments with the promoter-luciferase reporter fusion gene demonstrate that the 2-kb
5'-flanking region confers tissue specificity and hormone responsiveness to expression of the Ca2+ channel
1C-subunit gene. Electrophoretic mobility shift assays identified a region of the
1C-subunit gene promoter that
can bind transcription factors and appears to be important for gene expression.
calcium channel; promoter; transcription; myocyte; heart; dihydropyridine
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INTRODUCTION |
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L-TYPE CALCIUM CHANNELS play a central role in cardiac and smooth muscle excitation-contraction coupling. Abundance and function of the L-type Ca2+ channel is a major determinant of Ca2+ transients and contractile performance of myocytes (7, 34). When the abundance of functional Ca2+ channels is increased or decreased in physiological or pathological conditions, there are associated changes in excitation-contraction coupling (7, 13, 19, 28, 34, 41).
At least five types of Ca2+ channels have been defined
electrophysiologically: L, T, N, P/Q, and R (11, 38). The L-type channel is the predominant type in heart and vascular tissue. There are
four subunits of the L-type Ca2+ channel proven to be
present in heart:
1,
2,
, and
. The
1-subunit alone exhibits limited function as a
voltage-dependent Ca2+ channel. Distinct isoforms of the
1-subunit, each a unique gene product, are present in
various tissues. Thus
1S is the isoform expressed in
skeletal muscle,
1D in neuroendocrine tissues, and
1C in cardiac and vascular smooth muscle as well as in
brain. Neuronal tissue expresses
1A-,
1B-, and
1E-subunits, which are
insensitive to dihydropyridine (DHP) (36). The
1C-subunit is known to undergo alternative splicing,
leading to functionally and molecularly distinct isoforms:
1C-A appears to be the predominant isoform expressed in
heart,
1C-B in smooth muscle, and
1C-C in
neuronal tissue. The
1C-subunit gene is the subject of
the present investigation. The product of the gene is often termed the
DHP receptor because of its ability to bind organic Ca2+
channel antagonists.
The abundance of DHP receptors may be regulated by several processes;
there are data suggesting that regulation of mRNA abundance (mRNA
synthesis and degradation rates) plays an important role. However,
despite the evidence suggesting that transcriptional control is
critical for regulation of Ca2+ channel expression, little
direct information is available regarding mechanisms regulating
transcription of the
1C-subunit gene, and little is
known about control of tissue-specific and cell type-specific expression, despite progress in these areas for other ion channel genes. We previously reported that when myocytes are stimulated with
norepinephrine or isoproterenol, the increase in DHP receptor mRNA
abundance is followed by increases in Ca2+ current and
DHP-binding sites (26). Also, when adult cultured myocytes are grown in
the presence of high extracellular Ca2+, the increase in
DHP receptor mRNA levels is followed by increases in Ca2+
current and DHP-binding sites (7). Exposure of myocytes to agents
activating protein kinase C decreases Ca2+ channel
expression (25). During development, there appears to be an important
role for translational or posttranslational control of
1C-subunit expression (25). However, it appears very
likely that pretranslational control is important in immature and adult
cardiac myocytes. The precise mechanism of pretranslational control of
the DHP receptor has not been rigorously demonstrated, and there is
only limited knowledge regarding molecular mechanisms controlling
expression of other cation channels in heart or vascular smooth muscle;
more data are available for neuronal cation channels. For the rat brain
type II Na+ channel, there is a silencer region in the
5'-flanking region of the gene (21). The expression of the rat
1D-subunit gene is increased during differentiation in
the presence of retinoic acid or prostaglandin E1 (16). The
rat
1D-subunit gene has a novel enhancer comprised of an
(ATG)7 trinucleotide repeat (16). Finally, it has recently
been reported that the
1B-subunit gene of rat contains a
TATA-less promoter and a repressor in the distal upstream region (18).
The structure of the human
1C-subunit gene was reported
by Soldatov (40) and Yamada et al. (47). However, the sequence of the
human
1C-subunit exons near the 5'-end of the gene
is substantially different from the cDNA sequence of the rat aortic voltage-dependent channel
1-subunit reported by Koch et
al. (20) and the rabbit heart
1C-subunit cDNA described
by Mikami et al. (30). Furthermore, the structure of the
5'-flanking region and promoter of the cardiac DHP receptor has
not been reported.
As a first step toward understanding the mechanisms controlling
transcription of the rat cardiac
1C-subunit gene, we
cloned a 2.3-kb fragment of the 5'-flanking sequences and
identified the
1C-subunit gene transcription start site.
Here we report that the rat
1C-subunit gene contains a
complex TATA-less promoter. In addition, using deletion analysis of the
1C-subunit promoter-luciferase reporter gene constructs
and transfections and transient expression in cultured neonatal rat
cardiac ventricular myocytes and vascular smooth muscle cells, we have
characterized the transcriptional modulating activity of the
5'-flanking region. Regulatory regions in the 5'-flanking
region are identified that likely contribute to tissue-specific
expression and may contribute to hormone responsiveness of the gene.
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MATERIALS AND METHODS |
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Genome Walking
Genomic clones containing the first exon and 5'-flanking sequences were obtained from a modified rat genomic library (PromoterFinder, Clontech). Briefly, we examined five samples of uncloned rat genomic DNA fragments, which had been digested with five different restriction enzymes and subsequently ligated to a common adapter. A primary PCR was carried out using a primer complementary to the adapter (AP1) and a gene-specific primer (GSP1). The amplification was accomplished using Taq polymerase, 1.5 mM Mg2+, for 30 cycles at 62°C and a thermal cycler (model 2400, Perkin-Elmer). The primary PCR mixture was diluted and used as a template for a secondary PCR with use of a nested adapter primer (AP2) and a nested gene-specific primer (GSP2). PCR conditions were the same as for the initial and secondary PCR. The PCR products were examined on a 1% agarose gel, and DNA fragments of interest were then cloned into the plasmid pCRII (Invitrogen) for further sequencing and functional analysis. The gene-specific primers were designed on the basis of the sequence of the rat aortic voltage-dependent Ca2+ channel
1-subunit gene cDNA (20): 5'-CCC TTG AAC TTC CTC
TCT GTG TC-3' (GSP1) and 5'-CCA GGA GAA ATG TAG AAA CAG TTC
A-3' (GSP2).
DNA Sequencing and Computer Analysis
Subclone identity and orientation were verified by restriction endonuclease analysis and DNA sequencing. Sequencing was performed using the dideoxy-mediated chain-termination method of Sanger et al. (37) on alkaline-denatured, double-stranded plasmid DNA (6). Programs used for the analysis of DNA sequence included TFSEARCH (46) (University of Kyoto, Kyoto, Japan), ALIGN, and CLONE Manager (Scientific and Educational Software, Durham, NC).Primer Extension Analysis and Rapid Amplification of cDNA Ends
The transcription start site for the rat
1C-subunit mRNA
was determined by primer extension and by 5'-rapid amplification of cDNA ends (RACE). Primer extension analysis was performed with a
25-bp antisense oligonucleotide primer corresponding to the 5'-region of the rat aortic voltage-dependent Ca2+
channel
1-subunit gene cDNA(20). The primer was end
labeled with [
-32P]ATP (3,000 Ci/mmol) by
use of T4 polynucleotide kinase. Primer extension was carried out using
avian myeloblastosis virus reverse transcriptase (Promega). The
sequence of the primer for primer extension analysis was 5'-TAT
CCC ACT TGT ATT TTT CCT TGT A-3'. All the primers were selected
from the cDNA sequence of rat aortic voltage-dependent Ca2+
channel
1-subunit (20). On completion of the extension
reaction, the sample was fractionated by electrophoresis in a 9%
polyacrylamide-7 M urea gel along with products of a sequencing
reaction performed with the same primer. 5'-RACE analysis (35)
was performed using a 5'-RACE system kit (GIBCO/BRL) following
the manufacturer's protocol. The primers for 5'-RACE were
5'-CCC TTG AAC TTC CTC TCT GTC TC-3' and the anchor primer
supplied by the manufacturer. PCR was conducted for 35 cycles. Products
of the primer extension studies and 5'-RACE experiments were
analyzed by 1% agarose electrophoresis; products were isolated from
the gel and subcloned into pCR2.1 (Invitrogen) and sequenced.
Isolation and Culture of Neonatal Rat Myocytes and Vascular Smooth Muscle Cells
Neonatal myocytes were isolated and cultured using standard techniques, as previously described (26), and used on day 2. Cells were maintained in chemically defined medium plus 3% fetal bovine serum (34, 39). PAC-1 cells, a cell line derived from pulmonary artery vascular smooth muscle, were a generous gift of Li Li (Wayne State University). Cells were maintained in DMEM plus 10% fetal bovine serum and used during passages 2-3.Construction of
1C-Subunit
Promoter-Luciferase Fusion Plasmid
1C-subunit promoter-luciferase fusion plasmid
(pJDM10) containing the full-length
1C-subunit gene
5'-flanking sequence (fragment DHPRP, 2,055 bp) was constructed
by subcloning DHPRP into the polylinker region of the pXp1 plasmid (a
gift from Li Li) between restriction enzyme sites for BamH I
and Xho I; pXp1 contains the firefly luciferase gene and is
derived from a pSV40 vector (9, 33). Sequential deletion constructs
were generated from the pJDM10 plasmid by use of the Erase-a-Base
System (Promega, Madison, WI), which utilizes exonuclease III (14).
Four deletion constructs (D1-D4) were generated with different
1C-subunit 5'-flanking sequence lengths ranging up
to 1,984 bp. All plasmid constructs were sequenced to determine the
deletion end points.
Transfection of Mammalian Cells (Neonatal Cardiac Myocytes, PAC-1 Cells, and HEK-293 Cells)
All cells were plated onto 35-mm six-well dishes, as previously described (26). Freshly plated neonatal myocytes, 40-60% confluent PAC-1 cells, and HEK-293 cells were subjected to transfection. Transient transfections were carried out in regular culture medium with Fugene 6 (Boehringer). Briefly, 2 µg of promoter construct and 0.1 µg of
-gal DNA vector were diluted into
10-20 µl of serum-free medium. This mixture was added to 100 µl of serum-free medium with 5 µl of Fugene 6. After gentle mixing,
the mixture was set at room temperature for 15 min and then applied to
the cultured cells; 72 h later the cells were harvested, and luciferase
and
-galactosidase activity were measured. Ninety percent of the myocytes were contracting at the time of harvest. Cells were lysed, and
luciferase activity was assayed (9). The luminescence was measured over
a 5-s period on a plate luminometer (Berthold Instruments) and
expressed as arbitrary units.
-Galactosidase activity was measured
on the same lysate. The luciferase activity of each sample was
normalized to
-galactosidase activity for the same sample and
expressed as percentage of the activity of the full-length
1C-subunit promoter-luciferase fusion construct.
Transient transfections for each construct were conducted on at least
three separate cell cultures; data for each construct are presented as
means ± SE. In preliminary experiments the amount of
plasmid added for deletion mutants was adjusted; similar results, after
normalization, were obtained, so a fixed amount of plasmid was used for
subsequent experiments. For some experiments, cells were transfected
with the full-length flanking sequence (pJDM10), and cells were treated 72 h later with isoproterenol, phenylalanine plus propranolol, 8-bromocAMP (8-BrcAMP), or testosterone. For analysis of deletions, data were analyzed by the nonparametric Kruskil-Wallis one-way ANOVA
with the Systat program (Systat, Evanston, Il). Values are means ± SE.
Electrophoretic Mobility Shift Assays
Electrophoretic mobility shift assays (EMSAs) were carried out using nuclear extract from adult rat ventricular myocytes obtained as described by Dignam et al. (10). The DNA probe used in the assay was a PCR product from the full-length
1C-subunit
5'-flanking sequence. It was labeled by T4 polynucleotide kinase
and was subsequently gel purified. The binding assay contained 50,000 counts/min of probe and 6.25 µg of nuclear extract protein in binding
buffer (40 mM KCl, 15 mM HEPES, pH 7.9, 1 mM EDTA, 0.5 mM
dithiothreitol, 50% glycerol). After preincubation of the nuclear
extract with 1 µg of poly[d(I-C)] for 10 min with or
without a specific competitor, the binding reaction was conducted for
30 min at 22°C and then subjected to electrophoresis on a 4%
polyacrylamide gel. DNA-protein complexes were detected by autoradiography.
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RESULTS |
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Structure of the 5'-Flanking Sequence of the
1C-Subunit Gene
1C-subunit of the L-type
Ca2+ channel were designed and used to screen the genomic
library by using PCR-based genome walking techniques. The secondary PCR gave rise to four positive fragments from the five predigested genomic
DNA samples. The longest fragment, from the Ssp I library, was
cloned into the pCRII plasmid and sequenced (Fig.
1). The fragment is 2,297 bp long, the
most-3' 274 bp exhibiting 98% sequence identity with position +3
to +277 of the rat voltage-dependent Ca2+ channel
1-subunit cDNA (20) (Fig.
2). Thus the last 274 bp we cloned likely
comprise the first exon of the rat heart
1C-subunit. The
major transcription start site we identified (see below) is an
additional 38 bp upstream, suggesting a total of 314 bp of the first
exon in our genomic clone. Of interest, there is only 71% sequence
identity between the last 314 bp of this cloned rat sequence and the
cDNA sequence for the rabbit heart L-type Ca2+ channel
1-subunit (30). No significant homology was seen between the rat and the reported human DNA sequences for 314 bp of coding sequence of the L-type Ca2+ channel
1-subunit (40), indicating that the
NH2-terminal amino acid sequence for the human and rat
1C-subunits may differ significantly.
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Primer extension analysis was employed to confirm tentative
identification of the first exon and to identify the transcription start site(s) of the
1C-subunit gene (35). Six start
sites for transcription were identified over a 100-bp range (Fig.
3). The most intense band likely represents
the major transcription start site and is designated +1. There was no
canonical TATA box found in ~1,984 bp of the 5'-flanking region
of the gene. Primer extension analysis with full sequencing was also
performed and identified two additional transcription initiation sites,
for a total of eight possible sites, within the 100-bp region where other transcription initiation sites were identified. The cDNA sequence
we obtained from 5'-RACE, by use of the same primer used for
primer extension experiments, was identical to that obtained by
sequencing the genomic clone.
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For genes expressed at low levels, as occurs in myocytes for the DHP receptor, TATA-less promoters are not uncommon (39). Transcription initiation sites may occur at initiator (Inr) sequences with the sequence of 5'-Py-Py-A-N-A/T-Py-Py, where Py = C or T (3)'(5). Such an Inr sequence spans the +1 base identified as the major transcription initiation site by primer extension analysis. Other minor transcription start sites are indicated in Fig. 1. These minor transcription start sites do not display characteristics of an Inr. The 5'-flanking sequence of the 1,984 bp is shown in Figs. 1 and 2, as well as the sequence from +1 to +314. To confirm the primary transcription initiation site, we isolated and sequenced the products of two primer extension experiments. The sequences were identical to those immediately 3' to the major transcription initiation site identified in Fig. 1.
A putative translation start site with an appropriate open reading frame is present at bp +226. When translation is initiated at this site, the deduced amino acid sequence from the rat genomic clone is identical to that for the sequence deduced by Koch et al. (20) for the rat aorta voltage-dependent Ca2+ channel, except for one amino acid substitution at position 25 (Fig. 2).
Analysis of the Promoter and Upstream Putative Cis-Acting Elements
Because no Ca2+ channel
1C-subunit promoter
has been analyzed and reported in detail, a transcription factor
database was searched to identify potentially important
cis-acting regulatory elements (46). Analysis of the 1,984 nucleotides upstream of the major 5'-cap site revealed several
putative cis-acting elements that exhibited >85% sequence
identity to reported consensus recognition sites. Potentially important
cis-acting sequences are shown in Fig. 1. Multiple consensus
sequences for the cardiac-specific homeobox transcription factor Nkx2.5
are present (3, 5). Also present are consensus sequences for CRE-BP,
HRE, C/EBPb, and AP-1 (4, 32, 44, 45).
Analysis of Rat Ca2+ Channel
1C-Subunit Promoter Construct In Vitro
1984 to
+71) upstream of a luciferase reporter gene. Deletions were made
starting at the 5'-end of the chimera and progressing in the
3'-direction.
Transcriptional activity in cardiac myocytes.
To localize DNA elements that may play a role in controlling
transcription of the DHP receptor gene in cardiac myocytes, cultured neonatal cardiac myocytes were transiently transfected with the plasmid
pJDM10 containing the full-length flanking sequence or with sequential
deletion constructs (D1-D4). Normalized activities of the reporter
gene constructs in myocytes are shown in Fig. 4. Deletion of the 933 bp of the
5'-flanking region (deletion D1, bp
1984 to
1051)
produced a modest but significant increase in reporter gene activity
(P < 0.01), suggesting the presence of a repressor element in
the segment that was deleted. With deletion of an additional 325 bp
(D2), reporter gene activity was indistinguishable from that produced
by the full-length 5'-flanking sequence. When an additional 492 bp were deleted (D3), there was marked attenuation of reporter gene
activity (P < 0.01), with activity declining to ~20% of
that for the full-length 5'-flanking sequence. This deletion
removes consensus sequences for transcription factors NF-E2, c-Ets,
C/EBP, AP-1, and two Nkx2.5 sites. Thus, in the sequence of bp
726 to
234, there appear to be elements critical for
basal promoter activity. When the remaining bases of the
5'-flanking sequence upstream from the apparent major
transcription initiation site were deleted (D4), all reporter gene
activity was abolished (Fig. 4). Taken together, these data indicate
that, within this putative proximal-promoter element from
726 to
234 bp, there are critical enhancer elements that act
autonomously or, more likely, in concert to control basal expression of
the rat cardiac DHP receptor gene.
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Transcriptional activity in vascular smooth muscle cells.
To localize DNA elements that may play a role in controlling
transcription of the DHP receptor gene in vascular smooth muscle cells,
a series of experiments were conducted in PAC-1 cells that were
analogous to those in cardiac myocytes. The vascular smooth muscle
cells were transiently transfected with the plasmid pJDM10 containing
the full-length DHPRP or with sequential deletion mutants (D1-D4).
As was the case for myocytes, assays of reporter gene activity were
conducted. For vascular smooth muscle cells, there is marked
enhancement of reporter gene expression with deletion D1 (P < 0.01), suggesting the interaction of factor(s) from PAC-1 cells with
repressor element(s) in this domain. Deletion D3 had a profound effect
on reporter gene activity; this deletion almost abolished activity
(Fig. 5), indicating the presence of basal promoter elements in this domain.
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-galactosidase expression vector and
was transfected into myocytes and PAC-1 cells. Subsequently, X-gal
staining was performed. This putative promoter was able to drive
-galactosidase expression in these two types of cells, although it
showed less strong promoter activity than that of the positive control
vector with an SV40 promoter (data not shown).
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EMSA.
We performed EMSA as an initial approach to identify potentially
important regions regulating transcription. Four distinct segments of
the 2-kb 5'-flanking sequence were screened; segments were
selected that contained potential cis-acting sequences that were likely candidates for regulating gene expression in heart and
vascular smooth muscle. In initial experiments, three of the selected
sequences did not produce changes in electrophoretic mobility (data not
shown). Specifically, the DNA segment bp
1701 to
1445,
which contains a putative MyoD transcription factor element, did not
produce a shift in mobility. A 413-bp fragment (
846 to
434 bp; Fig. 7) demonstrated
specific binding with nuclear proteins of nuclear extracts from four
different preparations of purified adult rat myocytes. This fragment
contains putative cis-acting sequences for well-described
transcription factors, including Nkx2.5, NF-E3, c-Ets, AP-1, and
C/EBPb. Binding of the radiolabeled DNA-protein complex was inhibited
in a graded manner by addition of nonradioactive 413-bp probe (Fig. 7).
We were able to entirely abolish radiolabeled DNA-protein binding by
adding 200-fold molar excess of nonradioactive probe (data not shown). We repeated the experiments four times with similar results.
Interestingly, consensus sequences for Nkx2.5 and AP-1 are present
within this 413-bp DNA fragment; they are candidates for regulators of
basal DHP receptor expression.
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Hormone responsiveness.
We previously reported that, in the neonatal myocyte, abundance of mRNA
and protein for the DHP receptor is regulated by catecholamines over
the time course of hours (26). There is indirect evidence for
regulation of DHP receptor expression by catecholamines in human heart
as well (41). As an initial approach to identifying functional
cis-acting elements of importance in cardiac muscle, we
examined the response of the intact
1C-subunit
promoter-luciferase chimera to catecholamine analogs in neonatal
myocytes. Cells were transfected with the promoter-luciferase
construct, and luciferase assays were performed. Seventy-two hours
after transfection of myocytes with pJDM10, myocytes were treated with
the pure
-adrenergic agonist isoproterenol, the
-adrenergic
agonist phenylephrine plus the
-adrenergic antagonist propranolol
(26), or the membrane-permeant 8-BrcAMP (1 mM). Cells were treated for
1 or 4 h and then assayed for luciferase activity and for
-galactosidase activity.
1C-subunit twofold (26). At 1 h, phenylephrine had no effect on reporter gene activity, but by 4 h it
produced strong stimulation. Taken together, these data demonstrate
that 1.8 kb of 5'-flanking sequence of the DHP receptor gene
contains cis-acting elements sufficient to strongly enhance transcription in response to
- and
-adrenergic signaling in myocytes.
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DISCUSSION |
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The present investigation reports the cloning and partial
characterization of the rat DHP receptor
1C-subunit gene
5'-flanking sequence. Attention was focused on the promoter
region and sequences that are necessary for basal transcription and
that may direct tissue-specific expression. Sequence analysis revealed
that the 5'-flanking sequence lacks a canonical TATA sequence but
does contain a consensus Inr element, which corresponds to the major transcription start site determined by primer extension analysis. There
appear to be minor transcription initiation sites as well. The Inr
element typically contains within itself the transcription start site,
and that is the case for the rat DHP receptor gene (39). The
5'-flanking sequence for the
1C-subunit gene
appears to contain all requisite elements for binding of general
transcription factors (22). The 2-kb 5'-flanking sequence of the
1C-subunit gene contains a promoter capable of directing
its expression in neonatal ventricular myocytes and in vascular smooth
muscle cells. Deletion analysis of the 5'-flanking region in the
DHPRP-luciferase fusion gene indicates the presence of
cis-acting regulatory elements in the proximal 726 bp that
appear to be essential for myocyte- and smooth muscle cell-specific
expression of the
1C-subunit gene.
There has been considerable progress in understanding of molecular
mechanisms responsible for tissue- and cell-specific expression of
genes in noncardiac tissue, such as lymphocytes and hepatocytes. Although it has been somewhat slower, there has been recent progress in
understanding regulation of expression of several ion channels in
neurons and some progress for cardiac ion channels as well (16, 31, 42,
43). Trans-acting factors determining cardiac specificity of
gene expression are beginning to be identified, notably including the
mammalian analog of the Drosophila tinman gene, Nkx2.5, also
called Csx (5,23). Nkx2.5 is a murine homeobox-containing gene
specifically expressed in the developing heart; its expression is
restricted to cardiac myocytes from day 8.5 postcoitus through adulthood (23). The 2-kb 5'-flanking sequence for the
1C-subunit gene includes five consensus sequences for
Nkx2.5. Nkx2.5 appears to play an important role in developmental
events in the cardiac muscle lineage and in cardiac-specific gene
expression. It is a modest transcriptional activator (5).
Deletion analysis of the 5'-flanking sequence of the
1C-subunit promoter in myocytes and PAC-1 cells
demonstrates that deletion of DNA, including the proximal two Nkx2.5
consensus sequences (deletion from position
726 to
234,
D3) is associated with a substantial decrease in gene expression. EMSA
demonstrates specific binding of nuclear proteins to a portion of this
segment containing a consensus sequence for Nkx2.5. These data raise
the possibility that these sequences may possibly play an important
permissive role in
1C-subunit gene expression in
myocytes. The present studies of transcriptional regulation have been
conducted in model systems: cultured neonatal myocytes and a vascular
smooth muscle cell line. Whether similar mechanisms occur in vivo in
adult myocytes and smooth muscle cells remains to be determined.
Previous work has demonstrated that two splice variants of the
1C-subunit gene exist. The
1C-A-isoform
(also called Cach2a) can be identified by PCR and Northern analysis in
heart exclusively, whereas the
1C-B-isoform (also called
Cach2b) can be identified in brain, heart, aorta, trachea, and lung (2,
36). The signals that dictate alternative splicing leading to
expression of the
1C-A-isoform exclusively in heart are
unknown. It is possible that elements in the 5'-flanking region
may play a role.
Kamp et al. (16) studied transcriptional regulation of a neuronal
Ca2+ channel
1D-subunit gene. Nkx2.5
consensus sequences are not present in the 5'-flanking sequence
for this neuronal ion channel. However, the neuronal channel gene has a
distinctive (ATG)7 trinucleotide repeat sequence that
functions as an enhancer (16). No such sequences were observed here. A
cardiac K+ channel gene, Kv1.5, demonstrates an
increased transcription rate in rat ventricle and in GH3
pituitary cells in response to glucocorticoids (42, 43). Thus there is
precedent for transcription of a cardiac ion channel being under
control of a hormone. The consensus sequence for an HRE (15) is present
in the 5'-flanking sequence for the
1C-subunit
gene; its definitive function remains to be determined. HREs, in the
proper context, provide responsiveness to a variety of steroid
hormones, and this HRE may account for the increase in transcription of
the reporter gene in response to treatment of myocytes with testosterone.
Mori et al. (31) established that, in the 5'-flanking region of
the Kv1.5 gene, there is a cAMP response element (CRE) that functions as an enhancer in cardiac myocytes and as a silencer in
GH3 cells. In the 5'-flanking sequence of the
1C-subunit gene, the CRE consensus sequence is present
(position
1823), with uncertain function. On the basis of
previous work from this laboratory (26, 34), one might expect that
expression of the
1C-subunit gene may be enhanced by
cAMP-dependent processes. We demonstrated directly that, in cardiac
myocytes, cAMP-dependent signaling increased mRNA abundance for the
1C-subunit gene, DHP receptors, and functional Ca2+ channels (26). Thus we hypothesized the presence of a
CRE in the promoter region for the
1C-subunit gene,
which we now demonstrate to be present. Its functional activity remains
to be confirmed. Our data demonstrating that increasing intracellular
cAMP concentration via receptor-dependent and -independent processes
increases reporter gene expression suggest that this CRE may be
functional in cardiac muscle or that there is an additional functional
CRE further 5' than we have examined. Specific mutagenesis
studies are necessary to ascertain the activity of the CRE at bp
1823. There is quantitative correspondence between the increase
in reporter gene expression (2-fold) induced by isoproterenol, which we
observed in the present study, and the increase in steady-state mRNA
levels for the
1C-subunit gene in response to
isoproterenol (2-fold), which we previously reported in the same
myocyte culture system (26). These findings suggest that the primary
process regulating
1C-subunit transcript levels in
response to protein kinase A-dependent signals consists of alterations
in transcription initiation rate. Preliminary findings suggest that
other subunits of the L-type Ca2+ channel may be under
transcriptional control by isoproterenol as well (12).
An additional postulated process by which transcription of the
1C-subunit gene may be modulated, on the basis of
previous studies, is through an AP-1 site. A consensus AP-1 site is
present at position
595 in the 5'-flanking sequence of the
1C-subunit gene. A deletion from position
726 to
234 (D3) removes the AP-1 site and markedly decreases basal
reporter gene activity in myocytes. We showed (7, 26) that activation
of protein kinase C and elevation of cytosolic Ca2+
concentrations in myocytes alter
1C-subunit gene mRNA
abundance. Protein kinase C activation decreases message levels;
increased cytosolic Ca2+ increases message levels (7). Both
effectors activate the transcription factor AP-1 (45). We now
demonstrate that, over a time course slower than that for the
-adrenergic response,
-adrenergic stimulation enhances reporter
gene expression. Thus the AP-1 site at position
596 may be
functionally important.
In addition to consensus sequences for trans-acting factors
already discussed, there are consensus sequences for factors that are
less obvious candidates for regulation of
1C-subunit
gene expression. Consensus sequences for two muscle determination
factors, MyoD and MEF2, are present, but with unknown function (8). The
D1 deletion removes the MyoD and MEF2 sequences, but there is no
associated repression of reporter gene expression. Indeed, in myocytes
and PAC-1 cells, this deletion produced augmented basal reporter gene
activity. An MEF2-like motif appears to be a requisite for
cardiac-specific expression of the rat troponin T gene. An MEF2 element
is present in the proximal promoter region of the feline cardiac
Na+/Ca2+ exchanger (1). This exchanger is, like
the DHP receptor, a sarcolemmal protein critical to transmembrane
Ca2+ flux in cardiac muscle.
In summary, we report an initial characterization of the rat L-type
Ca2+ channel
1C-subunit gene
5'-flanking sequence, including 1984 bp upstream of the major
transcription initiation site. The promoter is TATA-less but contains
an Inr sequence. There are multiple transcription start sites. However,
primer extension experiments show a major transcription start site.
Deletion analysis of the 5'-flanking sequence in cardiac myocytes
and in vascular smooth muscle cells demonstrated that the
726-
to
234-bp fragment provides the majority of basal promoter
activity. Regions of the 5'-flanking region containing two Nkx2.5
transcription factor consensus sequences may be critical for expression
of the gene in these tissues. This putative promoter for the
1C-subunit of the L-type Ca2+ channel can be
regulated by neurotransmitters and hormones known to be important for
cardiovascular function.
| |
ACKNOWLEDGEMENTS |
|---|
We appreciate the technical assistance of Bin Chen.
| |
FOOTNOTES |
|---|
* L. Liu and Q. I. Fan contributed equally to this work.
This work was supported in part by National Heart, Lung, and Blood Institute Grant R01-HL-54086 (J. D. Marsh), a grant-in-aid from the Michigan Affiliate of the American Heart Association (J. D. Marsh), a grant from the Veterans Administration (J. D. Marsh), and a fellowship grant from the Michigan Affiliate of the American Heart Association (L. Liu).
The costs of publication of this article were defrayed in part by the payment of page charges. The article must therefore be hereby marked "advertisement" in accordance with 18 U.S.C. §1734 solely to indicate this fact.
Address for reprint requests and other correspondence: J. D. Marsh, Program in Molecular and Cellular Cardiology, Wayne State University School of Medicine, 421 E. Canfield Ave., Detroit, MI 48201 (marsh{at}cardiology.harper.wayne.edu).
Received 24 June 1999; accepted in final form 27 October 1999.
| |
REFERENCES |
|---|
|
|
|---|
1.
Barnes, K,
Cheng G,
Dawson MM,
and
Menick DR.
Cloning of cardiac, kidney, and brain promoters of the feline ncx1 gene.
J Biol Chem
272:
11510-11517,
1997
2.
Biel, M,
Hullin R,
Freundner S,
Singer D,
Dascal D,
Flockerzi V,
and
Hofmann F.
Tissue-specific expression of high-voltage-activated dihydropyridine sensitive L-type calcium channels.
Eur J Biochem
200:
81-88,
1991[ISI][Medline].
3.
Bucher, P,
and
Trifonov E.
Compilation and analysis of eukaryotic POL II promoter sequences.
Nucleic Acids Res
14:
10009-10026,
1986
4.
Cao, Z,
Umek RM,
and
McKnight SL.
Regulated expression of three C/EBP isoforms during RT adipose conversion of 3T3-L1 cells.
Genes Dev
5:
1538-1552,
1991
5.
Chen, C,
and
Schwartz RJ.
Identification of novel DNA binding targets and regulatory domains of a murine Tinman homeodomain factor, Nkx2.5.
J Biol Chem
270:
15628-15633,
1995
6.
Chen, E,
and
Seeburg P.
Supercoil sequencing: a fast and simple method for sequencing plasmid DNA.
DNA Cell Biol
4:
165-170,
1985.
7.
Davidoff, AJ,
Maki TM,
Ellingsen O,
and
Marsh JD.
Expression of calcium channels in adult cardiac myocytes is regulated by calcium.
J Mol Cell Cardiol
29:
1791-1803,
1997[ISI][Medline].
8.
Davis, RL,
Cheng P-F,
Lassar AB,
and
Weintraub H.
The MyoD DNA binding domain contains a recognition code for muscle-specific gene activation.
Cell
60:
733-746,
1990[ISI][Medline].
9.
De Wet, JR,
Wood KV,
DeLuca M,
Hekinski DR,
and
Subramani S.
Firefly luciferase gene: structure and expression in mammalian cells.
Mol Cell Biol
7:
725-727,
1987
10.
Dignam, DJ,
Lebowitz RM,
and
Roeder RG.
Accurate transcription initiation by RNA polymerase II in soluble extracts from isolated mammalian nuclei.
Nucleic Acids Res
11:
1475-1489,
1983
11.
Ellinor, PT,
Zhang JF,
Randall AD,
Zhou M,
Schwarz TL,
Tsien RW,
and
Horne WA.
Functional expression of a rapidly inactivating neuronal calcium channel.
Nature
363:
455-458,
1993[Medline].
12.
Fan, QI,
Chen B,
and
Marsh JD.
Transcriptional regulation of calcium channel expression in neonatal rat ventricular myocytes (Abstract).
Circulation
98:
I-379,
1998.
13.
Gruver, EJ,
Glass MG,
Marsh JD,
and
Gwathmey JK.
An animal model of dilated cardiomyopathy: characterization of dihydropyridine receptors and contractile performance.
Am J Physiol Heart Circ Physiol
265:
H1704-H1711,
1993
14.
Henikoff, S.
Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.
Gene
28:
351-359,
1984[ISI][Medline].
15.
Javahery, R,
Khachi A,
Lo K,
Zenzie-Gregory B,
and
Smale ST.
DNA sequence requirements for transcriptional initiator activity in mammalian cells.
Mol Cell Biol
14:
116-127,
1994
16.
Kamp, TJ,
Mitas M,
Fields KL,
Asoh S,
Chin H,
Marban E,
and
Nirenberg M.
Transcriptional regulation of the neuronal L-type calcium channel
1D subunit gene.
Cell Mol Neurobiol
15:
307-326,
1995[ISI][Medline].
17.
Kawasaki, R,
Machado C,
Baga J,
Reinoehl J,
Steinman R,
Fromm B,
and
Lehmann M.
Torsade de pointes in complete heart block: evidence for increased female susceptibility.
J Cardiovasc Electrophysiol
6:
1032-1038,
1995[ISI][Medline].
18.
Kim, DS,
Jung HH,
Park SH,
and
Chin H.
Isolation and characterization of the 5'-upstream region of the human N-type calcium channel
1B-subunit gene.
J Biol Chem
272:
5098-5104,
1997
19.
Kim, D,
Marsh JD,
and
Smith TW.
Effects of thyroid hormone on slow Ca channel function in cultured chick ventricular cells.
J Clin Invest
80:
88-94,
1987.
20.
Koch, WJ,
Ellinor PT,
and
Schwartz A.
cDNA cloning of a dihydropyridine-sensitive calcium channel from rat aorta.
J Biol Chem
265:
17786-17791,
1990
21.
Kraner, SD,
Chong JA,
Tsay HJ,
and
Mandel G.
Silencing the type II sodium channel gene: a model for neural-specific gene regulation.
Neuron
9:
37-44,
1992[ISI][Medline].
22.
Kraus, RJ,
Murray EE,
Wiley SR,
Zink NM,
Loritz K,
Gelembiuk GW,
and
Mertz JE.
Experimentally determined weight matrix definitions of the initiator and TBP binding site elements of promoters.
Nucleic Acids Res
24:
1531-1539,
1996
23.
Kumoro, I,
and
Izumo S.
Csx: a murine homeobox-containing gene specifically expressed in developing heart.
Proc Natl Acad Sci USA
90:
8145-8149,
1993
24.
Lehmann, M,
Frankovich D,
Timothy K,
Keating M,
Fromm B,
and
Vincent G.
Sex differences in QTc may reflect QTc shortening in men during adolescence: evidence from genotypically-characterized long QT syndrome families (Abstract).
Circulation
92:
I-680,
1995.
25.
Liu, L,
O'Hara DS,
Poornima I,
Hines RN,
and
Marsh JD.
Developmental regulation of dihydropyridine receptor expression in heart (Abstract).
J Mol Cell Cardiol
29:
A156,
1997.
26.
Maki, TM,
Gruver EJ,
Davidoff AJ,
Izzo N,
Toupin D,
Colucci W,
Marks AR,
and
Marsh JD.
Regulation of calcium channel expression in neonatal myocytes by catecholamines.
J Clin Invest
97:
656-663,
1996[ISI][Medline].
27.
Makkar, R,
Fromm B,
Steinman R,
Meissner M,
and
Lehmann M.
Female gender as a risk factor for torsade de pointes associated with cardiovascular drugs.
JAMA
270:
2590-2597,
1993[Abstract].
28.
Marsh, JD,
and
Allen PD.
Developmental regulation of cardiac calcium channels and contractile sensitivity to [Ca2+]o.
Am J Physiol Heart Circ Physiol
256:
H179-H185,
1989
29.
Marsh, JD,
Lehmann MD,
Ritchie RH,
Gwathmey JK,
Green GE,
and
Schiebinger RJ.
Androgen receptors mediate hypertrophy in cardiac myocytes.
Circulation
256:
256-261,
1998.
30.
Mikami, A,
Imoto K,
Tanabe T,
Niidome T,
Mori Y,
Takeshima H,
Narumiya S,
and
Numa S.
Primary structure and functional expression of the cardiac dihydropyridine-sensitive calcium channel.
Nature
340:
230-233,
1989[Medline].
31.
Mori, Y,
Matsubara H,
Folco E,
Siegel A,
and
Koren G.
The transcription of a mammalian voltage-gated potassium channel is regulated by cAMP in a cell-specific manner.
J Biol Chem
268:
26482-26493,
1993
32.
Nomura, N,
Zu YL,
Maekawa T,
Tabata S,
Akiyama T,
and
Ishii S.
Isolation and characterization of a novel member of the gene family encoding the cAMP response element-binding protein CRE.
J Biol Chem
268:
4259-4266,
1993
33.
Nordeen, SK.
Luciferase reporter gene vectors for analysis of promoters and enhancers.
Biotechniques
5:
454-457,
1988.
34.
Ogawa, S,
Barnett JV,
Sen L,
Galper JB,
Smith TW,
and
Marsh JD.
Direct contact between sympathetic neurons and rat cardiac myocytes in vitro increases expression of functional calcium channels.
J Clin Invest
89:
1085-1093,
1992.
35.
O'Hara, O,
Dorit RL,
and
Gilbert W.
One-sided polymerase chain reaction: the amplification of DNA.
Proc Natl Acad Sci USA
86:
5673-5677,
1989
36.
Perez-Reyes, E,
Wei XY,
Castellano A,
and
Birnbaumer L.
Molecular diversity of L-type calcium channels.
J Biol Chem
265:
20430-20436,
1990
37.
Sanger, F,
Nicklen S,
and
Coulson A.
DNA sequencing with chain-terminating inhibitors.
Proc Natl Acad Sci USA
74:
5463-5467,
1977
38.
Sather, WA,
Tanabe T,
Zhang JF,
Mori Y,
Adams ME,
and
Tsien RW.
Distinctive biophysical and pharmacological properties of class A (BI) calcium channel
1 subunits.
Neuron
11:
291-303,
1993[ISI][Medline].
39.
Smale, ST,
and
Baltimore D.
The "initiator" as a transcription control element.
Cell
57:
103-113,
1989[ISI][Medline].
40.
Soldatov, NM.
Genomic structure of the L-type calcium channel.
Genomics
22:
77-87,
1994[ISI][Medline].
41.
Takahashi, T,
Allen PD,
Lacro RV,
Marks AR,
Dennis AR,
Schoen FJ,
Grossman W,
Marsh JD,
and
Izumo S.
Expression of dihydropyridine receptor (Ca2+ channel) and calsequestrin genes in the myocardium of patients with end-stage heart failure.
J Clin Invest
90:
927-935,
1992.
42.
Takimoto, K,
Fomina AF,
Gealy R,
Trimmer JS,
and
Levitan ES.
Dexamethasone rapidly induces Kv1.5 K+ channel gene transcription and expression in colonal pituitary cells.
Neuron
11:
359-369,
1993[ISI][Medline].
43.
Takimoto, K,
and
Levitan ES.
Glucocorticoid induction of Kv1.5 K+ channel gene expression in ventricle of rat heart.
Circ Res
75:
1006-1013,
1994
44.
Von der Ahe, D,
Renoir JM,
Buchou T,
Baulieu EE,
and
Beato T.
Receptors for glucocorticosteroid and progesterone recognize distinct features of a DNA regulatory element.
Proc Natl Acad Sci USA
83:
2817-2821,
1986
45.
Whitmarsh, A,
and
Davis R.
Transcription factor AP-1 regulation by mitogen-activated protein kinase signal transduction pathways.
J Mol Med
74:
597-607,
1996.
46.
Wingender, E,
Dietze P,
Karas H,
and
Knuppel R.
TRANSFAC: a database on transcription factors and their DNA binding sites.
Nucleic Acids Res
24:
239-241,
1996.
47.
Yamada, Y,
Masuda K,
Li Q,
Ihara Y,
Kubota A,
Miura T,
Nakamura K,
Fujii Y,
Seino S,
and
Seino Y.
The structures of the human calcium channel
1 subunit (CACNL1A2) and
subunit (CACNLB3) gene.
Genomics
27:
312-319,
1995[ISI][Medline].
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